Publications
Abdulla MH, Lim KC, Sajid M, McKerrow JH, Caffrey CR. Schistosomiasis mansoni: novel chemotherapy using a cysteine protease inhibitor, PLoS Med. 4(1), e14 (2007). [Pubmed]
Aggarwal R, Kumar V, Tyagi P, Singh SP. Synthesis and antibacterial activity of some new1-heteroaryl-5-amino-3H/methyl-4-phenylpyrazoles, Bioorg Med Chem. 14(6) 1785-91 (2006). [Pubmed]
Allen JJ, Li M, Brinkworth CS, Paulson JL, Wang D, Hübner A, Chou WH, Davis RJ, Burlingame AL, Messing RO, Katayama CD, Hedrick SM, Shokat KM. A semisynthetic epitope for kinase substrates, Nat Methods 4(6) 511-6 (2007). [Pubmed]
Allen JJ, Shokat KM. Chemical genomics: dialed in transcriptional network control with non-steroidal glucocorticoid receptor modulators, ACS Chem Biol 1(3) 139-40 (2006). [Pubmed]
Atsriku C, Benz CC, Scott GK, Gibson BW, Baldwin MA. Quantification of Cysteine Oxidation in Human Estrogen Receptor by Mass Spectrometry, Anal Chem 79 3083-3090 (2007). [Pubmed]
Békési A, Pukáncsik M, Muha V, Zagyva I, Leveles I, Hunyadi-Gulyás E, Klement E, Medzihradszky KF, Kele Z, Erdei A, Felföldi F, Kónya E, Vértessy BG. A novel fruitfly protein under developmental control degrades uracil-DNA, Biochem Biophys Res Commun. 355(3) 643-8 (2007). [Pubmed]
Beltrao P, Trinidad JC, Fiedler D, Roguev A, Lim WA,Shokat KM, Burlingame AL, Krogan NJ. Evolution of phosphoregulation: Comparison of phosphorylation patterns across yeast species, PLoS Biol. 7(6) e1000134 (2009). [Pubmed]
Benz CC, Atsriku C, Yau C, Britton D, Schilling B, Gibson BW, Baldwin MA, Scott GK. Novel pathways associated with quinone-induced stress in breast cancer cells, Drug Metab Rev 38(4) 601-13 (2006). [Pubmed]
Birkó Z, Bialek S, Buzás K, Szájli E, Traag BA, Medzihradszky KF, Rigali S, Vijgenboom E, Penyige A, Kele Z, van Wezel GP, Biró S. The secreted signaling protein factor C triggers the A-factor response regulon in Streptomyces griseus: overlapping signaling routes, Mol Cell Proteomics 6(7) 1248-56 (2007). [Pubmed]
Bozoky Z, Alexa A, Dancsok J, Gogl G, Klement E, Medzihradszky KF, Friedrich P. Identifying calpain substrates in intact S2 cells of Drosophila, Arch Biochem Biophys. 481(2) 219-25 (2009). [Pubmed]
Bradshaw RA, Medzihradszky KF, Oses J, Burlingame AL. Expression Proteomics: Elucidating Signal-Generated Protein Modifications, HUPO 6th Annual World Congress Program Book, p272 2007.
Britton DJ, Scott GK, Schilling B, Atsriku C, Held J, Gibson BW, Benz CC, Baldwin MA. A Novel Serine Phosphorylation Site Detected in the N-Terminal Domain of Estrogen Receptor Isolated from Human Breast Cancer Cells, J Amer Soc Mass Spectrom. 19(5) 729-40 (2008). [Pubmed]
Casado P, Prado MA, Zuazua-Villar P, Del Valle E, Artime N, Cabal-Hierro L, Rupérez P, Burlingame AL, Lazo PS, Ramos S. Microtubule interfering agents and KSP inhibitors induce the phosphorylation of the nuclear protein p54(nrb), an event linked to G2/M arrest, J Proteomics. 71(6) 592-600 (2009). [Pubmed]
Casati P, Campi M, Chu F, Suzuki N, Maltby D, Guan S, Burlingame AL, Walbot V. Histone acetylation and chromatin remodeling are required for UV-B–dependent transcriptional activation of regulated genes in maize, Plant Cell 20(4) 827-842 (2008). [Pubmed]
Chalkley RJ, Baker PR, Medzihradszky KF, Lynn AJ, Burlingame AL. In-depth analysis of tandem mass spectrometry data from disparate instrument types, Mol Cell Proteomics. 7(12) 2386-98 (2008). [Pubmed]
Chalkley R J, Brinkworth C S, Burlingame A L. Side-chain fragmentation of alkylated cysteine residues in electron capture dissociation mass spectrometry, J Am Soc Mass Spectrom 17(9) 1271-4 (2006). [Pubmed]
Chalkley RJ, Thalhammer A, Schoepfer R, Burlingame AL. Identification of protein O-GlcNAcylation sites using electron transfer dissociation mass spectrometry on native peptides, Proc Natl Acad Sci U S A. 106(22)8894-9 (2009). [Pubmed]
Choe Y, Leonetti F, Greenbaum DC, Lecaille F, Bogyo M, Brömme D, Ellman JA, Craik CS. Substrate profiling of cysteine proteases using a combinatorial peptide library identifies functionally unique specificities, J Biol Chem 281(18) 12824-32 (2006). [Pubmed]
Chu F, Mahrus S, Craik CS, Burlingame AL. Isotope-coded and affinity-tagged cross-linking (ICATXL): an efficient strategy to probe protein interaction surfaces, J Am Chem Soc 128(32) 10362-3 (2006). [Pubmed]
Chu F, Maynard JC, Chiosis G, Nicchitta CV, Burlingame AL. Identification of novel quaternary domain interactions in the Hsp90 chaperone, GRP94, Protein Sci 15(6) 1260-9 (2006). [Pubmed]
Chu F, Nusinow DA, Chalkley RJ, Plath K, Panning B, Burlingame AL. Mapping post-translational modifications of the histone variant MacroH2A1 using tandem mass spectrometry, Mol Cell Proteomics 5(1) 194-203 (2006). [Pubmed]
Cohen MC, Hadjivassiliou H, Taunton J. A clickable inhibitor reveals context-dependent autoactivation of p90 RSK, Nat Chem Biol 3(3) 156-60 (2007). [Pubmed]
Conrad F, Zhu X, Zhang X, Chalkley RJ, Burlingame AL, Marks JD, Liu B. Human antibodies targeting cell surface antigens overexpressed by the hormone refractory metastatic prostate cancer cells: ICAM-1 is a tumor antigen that mediates prostate cancer cell invasion, J Mol Med. 87(5) 507-514 (2009). [Pubmed]
Conway MC, Whittal RM, Baldwin MA, Burlingame AL, Balhorn R. Electrospray mass spectrometry of NeuAc oligomers associated with the Cfragment of the tetanus toxin, J Am Soc Mass Spectrom. 17(7) 967-76 (2006). [Pubmed]
Cyran CC, Fu Y, Raatschen H-J, Rogut VS, Chaopathomkul B, Shames DM, Wendland MF, Yeh BM, Brasch RC. New Macromolecular Polymeric MRI Contrast Agents for Application in the Differentiation of Cancer from Benign Soft Tissues, J Magn Reson Imaging 27(3) 581-589 (2008). [Pubmed]
Darula Z, Medzihradszky KF. Affinity-enrichment and characterization of mucin core 1-type glycopeptides from bovine serum, Mol Cell Proteomics 2009 Aug 12. [Epub ahead of print] [Pubmed]
Debela M, Beaufort N, Magdolen V, Schecter NM, Craik CS, Schmitt M, Bode W, Goettig P. Structures and Specificity of the human kallikrein-related peptidases KLKs 4, 5, 6, and 7, Biol. Chem, 389(6) 623-32 (2008). [Pubmed]
Delak K, Harcup C, Lakshminarayanan R, Fan Y, Moradian-Oldak J, Evans JS. The Tooth Enamel Protein, Porcine Amelogenin, is an Intrinsically Disordered Protein with an Extended Molecular Configuration in the Monomeric Form, Biochemistry 48(10) 2272-2281 (2009). [Pubmed]
Delcroix M, Medzihradsky K, Caffrey CR, Fetter RD, McKerrow JH. Proteomic analysis of adult S. mansoni gut contents, Mol Biochem Parasitol 154(1) 95-97 (2007). [Pubmed]
Delcroix M, Sajid M, Caffrey CR, Lim KC, Dvorák J, Hsieh I, Bahgat M, Dissous C, McKerrow JH. A multienzyme network functions in intestinal protein digestion by a platyhelminth parasite, J Biol Chem. 281(51) 39316-29 (2006). [Pubmed]
Deng Z, Zhang X, Tang W, Oses-Prieto JA, Suzuki N, Gendron JM, Chen H, GuanS, Chalkley RJ, Peterman TK, Burlingame AL, Wang ZY. A proteomics study of brassinosteroid response in Arabidopsis, Mol Cell Proteomics. 6(12) 2058-71 (2007). [Pubmed]
Dvorák J, Mashiyama ST, Braschi S, Sajid M, Knudsen GM, Hansell E, Lim KC,Hsieh I, Bahgat M, Mackenzie B, Medzihradszky KF, Babbitt PC, Caffrey CR,McKerrow JH. Differential use of protease families for invasion by schistosome cercariae, Biochimie 90(2) 345-58 (2008). [Pubmed]
Fan YW, Sun Z, Wang RZ, Abbott C, Moradian-Oldak J. Enamel inspired nanocomposite fabrication through amelogenin supramolecular assembly, Biomaterials 28(19) 3034-42 (2007). [Pubmed]
Fang Z, Miao Y, Ding X, Deng H, Liu S, Wang F, Zhou R, Watson C, Fu C, HuQ, Lillard JW Jr, Powell M, Chen Y, Forte JG, Yao X. Proteomic identification and functional characterization of a novel ARF6GTPase-activating protein, ACAP4, Mol Cell Proteomics 5(8) 1437-49 (2006). Erratum in Mol Cell Proteomics 5(9) 1718 (2006). [Pubmed]
Faouzi S, Medzihradszky KF, Hefner C, Maher JJ, Correia MA. Characterization of the physiological turnover of native and inactivated cytochromes P450 3A in cultured rat hepatocytes: a role for the cytosolic AAA ATPase p97, Biochemistry 46(26) 7793-803 (2007). [Pubmed]
Farady CJ, Sun J, Darragh MR, Miller SM, Craik CS. The Mechanism of Inhibition of Antibody-Based Inhibitors of Membrane-Type Serine Protease 1 (MT-SP1), J Mol Biol. 369(4) 1041-51 (2007). [Pubmed]
Fernandez F, Trinidad JC, Blank M, Feng D-D, Burlingame AL and Garner CC. Normal protein composition of synapses in Ts65Dn mice: a mouse model of Down syndrome, J Neurochem. 110(1) 157-169 (2009). [Pubmed]
Fu Y, Nitecki DE, Maltby D, Simon GH, Berejnoi K, Raatschen H-J, Yeh BM, Shames DM, Brasch RC. Dendritic iodinated contrast agents with PEG-cores for CT imaging: synthesis and preliminary characterization, Bioconjug Chem. 17(4) 1043-56 (2006). [Pubmed]
Fu Y, Raatschen HJ, Nitecki DE, Wendland MF, Novikov V, Fournier LS, Cyran C, Rogut V, Shames DM, Brasch RC. Cascade polymeric MRI contrast media derived from poly(ethylene glycol) cores: initial syntheses and characterizations, Biomacromolecules 8(5) 1519-1529 (2007). [Pubmed]
Fujiwara Y, Minor DL Jr. X-ray crystal structure of a TRPM assembly domain reveals an antiparallel four-stranded coiled-coil, J Mol Biol. 383(4) 854-870 (2008). [Pubmed]
Gampala SS, Kim TW, He JX, Tang W, Deng Z, Bai MY, Guan S, Lalonde S, Sun Y, Gendron JM, Chen H, Shibagaki N, Ferl RJ, Ehrhardt D, Chong K, Burlingame AL, Wang ZY. An Essential Role for 14-3-3 Proteins in Brassinosteroid Signal Transduction in Arabidopsis, Dev Cell 13(2) 177-189 (2007). [Pubmed]
Goetz DH, Choe Y, Hansell E, Chen YT, McDowell M, Jonsson CB, Roush WR, McKerrow J, Craik CS. Substrate Specificity Profiling and Identification of a New Class of Inhibitor for the Major Protease of the SARS Caronavirus, Biochemistry 46(30) 8744-52 (2007). [Pubmed]
Gräub R, Lancero H, Pedersen A, Chu M, Padmanabhan K, Xu XQ, Spitz P, Chalkley R, Burlingame AL, Stokoe D, Bernstein HS. Cell cycle-dependent phosphorylation of human CDC5 regulates RNA processing, Cell Cycle 7(12) 1795-803 (2008). [Pubmed]
Guerrero C, Tagwerker C, Kaiser P, Huang L. An integrated mass spectrometry-based proteomic approach: quantitative analysis of tandem affinity-purified in vivo cross-linked protein complexes (QTAX) to decipher the 26 S proteasome-interacting network, Mol Cell Proteomics 5(2) 366-78 (2006). [Pubmed]
Hansell E, Braschi S, Medzihradszky KF, Sajid M, Debnath M, Ingram J, Lim KC, McKerrow JH. Proteomic analysis of skin invasion by blood fluke larvae, PLoS Negl Trop Dis. 2(7) e262 (2008). [Pubmed]
He X, Alian A, Stroud R, Ortiz de Montellano PR. Pyrrolidine Carboxamides as a Novel Class of Inhibitors of Enoyl Acyl Carrier Protein Reductase of Mycobacterium tuberculosis, J Med Chem. 49(21) 6308-6323 (2006). [Pubmed]
Hirsch J, Hansen KC, Choi S, Noh J, Hirose R, Roberts JP, Matthay MA, Burlingame AL, Maher JJ, Niemann CU. Warm ischemia-induced alterations in oxidative and inflammatory proteins inhepatic Kupffer cells in rats, Mol Cell Proteomics. 5(6) 979-86 (2006). [Pubmed]
Hirsch J, Hansen KC, Sapru A, Frank JA, Chalkley RJ, Fang X, Trinidad JC, Baker P, Burlingame AL, Matthay MA. Impact of Low and High Tidal Volumes on the Rat Alveolar Epithelial Type II Cell Proteome, Am J Respir Crit Care Med. 175(10) 1006-13 (2007). [Pubmed]
Hirsch J, Niemann CU, Hansen KC, Su X, Choi S, Frank JA, Fang X, Hirose R, Theodore P, Sapru A, Burlingame AL, Matthay, MA. Alterations in the Proteome of Pulmonary Alveolar Type II Cells in the Rat after Liver Ischemia, Crit Care Med. 36(6) 1846-54 (2008). [Pubmed]
Hirsch J, Ware B, Matthay M. “Pulmonary Proteomics” in Clinical Proteomics: From Diagnosis to Therapy; van Eyck J and Dunn M, Eds. Hoboken, NJ: Wiley Inc. 323-348 2008.
Hlavanda E, Klement E, Kókai E, Kovács J, Vincze O, Tökési N, Orosz F, Medzihradszky KF, Dombrádi V, Ovádi J. Phosphorylation blocks the activity of tubulin polymerizationpromoting protein (TPPP): identification of sites targeted by different kinases, J Biol Chem. 282(40) 29531-9 (2007). [Pubmed]
Hostetter DR, Loeb CRK, Chu F, Craik CS. Hip is a Pro-survival Substrate of Granzyme B, J Biol Chem. 282(38) 27865-74 (2007). [Pubmed]
Huang L, Wojciechowski G, Ortiz de Montellano PR. Role of heme-protein covalent bonds in mammalian peroxidases. Protection of the heme by a single engineered heme-protein link in horseradish peroxidase, J Biol Chem. 281(28)18983-8 (2006). [Pubmed]
Huang Z, Park JI, Watson DS, Hwang P, Szoka FC Jr. Facile synthesis of multivalent nitrilotriacetic acid (NTA) and NTA conjugatesfor analytical and drug delivery applications, Bioconjug Chem. 17(6) 1592-600 (2006). [Pubmed]
Huang Z, Guo X, Li W, MacKay JA, Szoka FC. Acid-triggered transformation of diortho ester phosphocholine liposome, J Am Chem Soc 128 160-1 (2006). [Pubmed]
Huang ZH, Szoka FC. Sterol-modified phospholipids: cholesterol and phospholipid chimeras with improved biomembrane properties, J Am Chem Soc 130(46) 15702-15712 (2008). [Pubmed]
Hutamekalin P, Farkas AE, Orbok A, Wilhelm I, Nagyoszi P, Veszelka S, Deli MA, Buzas K, Hunyadi-Gulyas E, Medzihradszky KF, Meksuriyen D, Krizbai IA. Effect of nicotine and polyaromtic hydrocarbons on cerebral endothelial cells, Cell Biol Int 32(2) 198-209 (2008). [Pubmed]
Iacovides DC, O'Shea CC, Oses-Prieto J, Burlingame A, McCormick F. Critical role for arginine methylation in adenovirus-infected cells, J Virol. 81(23) 13209-17 (2007). [Pubmed]
Ilagan J, Yuh P, Chalkley RJ, Burlingame AL, Jurica MS. The Role of Exon Sequences in C Complex Spliceosome Structure, J Mol Biol. 2009 Sep 15. [Epub ahead of print] [Pubmed]
Ishida BY, Duncan KG, Bailey KR, Kane JP, Schwartz DM. High density lipoprotein mediated lipid efflux from retinal pigment epithelial cells in culture, Br J Ophthalmol 90(5) 616-20 (2006). [Pubmed]
Jiang Y, Trnka MJ, Medzihradszky KF, Ouellet H, Wang Y, Ortiz de Montellano, PR. Covalent heme attachment to the protein in human heme oxygenase-1 with selenocysteine replacing the His25 proximal iron ligand, J Inorg Biochem. 103(3) 316-25 (2009). [Pubmed]
Jimenez CR, Spijker S, De Schipper S, Lodder JC, Janse CK, Geraerts WPM, Van Minnen J, Syed NI, Burlingame AL, Smit AB, Li K. Peptidomics of a Single Identified Neuron Reveals Diversity of Multiple Neuropeptides with Convergent Actions on Cellular Excitability, J Neuroscience 26(2) 518-529 (2006). [Pubmed]
Jones LR, Goun EA, Shinde R, Rothbard JB, Contag CH, Wender PA. Releasable luciferin-transporter conjugates: tools for the real-time analysis of cellular uptake and release, J Am Chem Soc 128(20) 6526-7 (2006). [Pubmed]
Joubel A, Chalkley RJ, Medzihradszky KF, Hondermarck H, Burlingame AL. Identification of new p53 acetylation sites in Cos-1 cells, Mol Cell Proteomics 8(6) 1167-1173 2009. [Pubmed]
Kim EY, Rumpf CH, Fujiwara Y, Cooley ES, Van Petegem F, Minor DL Jr. Structures of CaV2 Ca2+/CaM-IQ domain complexes reveal binding modes that underlie calcium-dependent inactivation and facilitation, Structure 16(10) 1455-1467 (2008). [Pubmed]
Kiss A, Balikó G, Csorba A, Chuluunbaatar T, Medzihradszky KF, Alföldi L. Cloning and characterization of the DNA region responsible for Megacin A-216 production in Bacillus megaterium 216, J Bacteriol. 190(19) 6448-57 (2008). [Pubmed]
Kurucz E, Markus R, Zsamboki J, Folkl-Medzihradszky K, Darula Z, Vilmos P, Udvardy A, Krausz I, Lukacsovich T, Gateff E, Zettervall CJ, Hultmark D, Ando I. Nimrod, a putative phagocytosis receptor with EGF repeats in Drosophila plasmatocytes, Curr Biol. 17(7) 649-54 (2007). [Pubmed]
Lai HC, Liu TJ, Ting CT, Yang JY, Huang L, Wallace D, Kaiser P, Wang PH. Regulation of IGF-I receptor signaling in diabetic cardiac muscle: dysregulation of cytosolic and mitochondria HSP60, Am J Physiol Endocrinol Metab. 292(1) E292-7 (2007). [Pubmed]
Lampe JN, Floor SN, Gross JD, Nishida CR, Jiang Y, Trnka MJ, Ortiz de Montellano PR. Ligand-induced conformational heterogeneity of cytochrome P450 CYP119 identified by 2D NMR spectroscopy with the unnatural amino acid (13)C-p-methoxyphenylalanine, J Am Chem Soc 130(48) 16168-9 (2008). [Pubmed]
Lardinois OM, Maltby DA, Medzihradszky KF, Ortiz de Montellano PR, Tomer KB, Mason RP, Deterding LJ. Spin Scavenging Analysis of Myoglobin Protein-Centered Radicals Using Stable Nitroxide Radicals: Characterization of Oxoammonium Cation-Induced Modifications, Chem Res Toxicol. 22(6) 1034-49 (2009). [Pubmed]
Lazic A, Goetz DH, Nomura AM, Marnett AB, Craik CS. Substrate Modulation of Enzyme Activity in the Herpesvirus Protease Family, J Mol Biol. 373(4) 913-23 (2007). [Pubmed]
Liao M, Pabarcus MK, Wang Y, Hefner C, Maltby DA, Medzihradszky KF,Salas-Castillo SP, Yan J, Maher JJ, Correia MA. Impaired dexamethasone-mediated induction of tryptophan 2,3-dioxygenase inheme-deficient rat hepatocytes: translational control by a hepatic eIF2alphakinase, the heme-regulated inhibitor, J Pharmacol Exp Ther. 323(3) 979-89 (2007). [Pubmed]
Likó I, Mák M, Klement E, Hunyadi-Gulyás E, Pázmány T, Medzihradszky KF, Urbányi Z. Evidence for an extended interacting surface between beta-amyloid and serum amyloid P component, Neurosci Lett. 412(1) 51-5 (2007). [Pubmed]
Lim MD, Craik CS. Using specificity to strategically target proteases, Bioorg Med Chem. 17(3) 1094-1100 (2008). [Pubmed]
Leclerc P, Biarc J, St-Onge M, Gilbert C, Dussault AA, Laflamme C, Pouliot M. Nucleobindin co-localizes and associates with cyclooxygenase (COX)-2 in human neutrophils, PLoS ONE 3(5) e2229 (2008). [Pubmed]
Liz MA, Fleming CE, Nunes AF, Almeida MR, Mar FM, Choe Y, Craik CS. Powers JC, Bogyo M, Sousa MM. Substrate specificity of transthyretin: identification of natural substrates in the nervous system, Biochem J. 419(2) 467-74 (2009). [Pubmed]
Lucas JJ, Hayes GR, Kalsi HK, Gilbert RO, Choe Y, Craik CS, Singh BN. Characterization of a Cysteine Protease from Tritrichomonas Foetus that Induces Host Cell Apoptosis, Arch Biochem Biophys 477(2) 239-43 (2008). [Pubmed]
MacKinnon AL, Garrison JL, Hegde RS, Taunton J. Photo-leucine incorporation reveals the target of a cyclodepsipeptide inhibitor of cotranslational translocation, J Am Chem Soc 129(47 14560-1 (2007). [Pubmed]
Mahrus S, Trinidad JC, Barkan DT, Sali A, Burlingame AL, Wells JA. Global sequencing of proteolytic cleavage sites in apoptosis by specific labeling of protein N termini, Cell 134(5) 866-76, (2008). [Pubmed]
Mathivanan S, Ahmed M, Ahn NG, Alexandre H, Amanchy R, Andrews PC, Bader JS, Balgley BM, Bantscheff M, Bennett KL, Björling E, Blagoev B, Bose R, Brahmachari SK, Burlingame AL, Bustelo XR, Cagney G, Cantin GT, Cardasis HL, Celis JE, Chaerkady R, Chu F, Cole PA, Costello CE, Cotter RJ, Crockett D, DeLany JP, De Marzo AM, DeSouza LV, Deutsch EW, Dransfield E, Drewes G, Droit A, Dunn MJ, Elenitoba-Johnson K, Ewing RM, Van Eyk J, Faca V, Falkner J, Fang X, Fenselau C, Figeys D, Gagné P, Gelfi C, Gevaert K, Gimble JM, Gnad F, Goel R, Gromov P, Hanash SM, Hancock WS, Harsha HC, Hart G, Hays F, He F, Hebbar P, Helsens K, Hermeking H, Hide W, Hjernø K, Hochstrasser DF, Hofmann O, Horn DM, Hruban RH, Ibarrola N, James P, Jensen ON, Jensen PH, Jung P, Kandasamy K, Kheterpal I, Kikuno RF, Korf U, Körner R, Kuster B, Kwon MS, Lee HJ, Lee YJ, Lefevre M, Lehvaslaiho M, Lescuyer P, Levander F, Lim MS, Löbke C, Loo JA, Mann M, Martens L, Martinez-Heredia J, McComb M, McRedmond J, Mehrle A, Menon R, Miller CA, Mischak H, Mohan SS, Mohmood R, Molina H, Moran MF, Morgan JD, Moritz R, Morzel M, Muddiman DC, Nalli A, Navarro JD, Neubert TA, Ohara O, Oliva R, Omenn GS, Oyama M, Paik YK, Pennington K, Pepperkok R, Periaswamy B, Petricoin EF, Poirier GG, Prasad TS, Purvine SO, Rahiman BA, Ramachandran P, Ramachandra YL, Rice RH, Rick J, Ronnholm RH, Salonen J, Sanchez JC, Sayd T, Seshi B, Shankari K, Sheng SJ, Shetty V, Shivakumar K, Simpson RJ, Sirdeshmukh R, Siu KW, Smith JC, Smith RD, States DJ, Sugano S, Sullivan M, Superti-Furga G, Takatalo M, Thongboonkerd V, Trinidad JC, Uhlen M, Vandekerckhove J, Vasilescu J, Veenstra TD, Vidal-Taboada JM, Vihinen M, Wait R, Wang X, Wiemann S, Wu B, Xu T, Yates JR, Zhong J, Zhou M, Zhu Y, Zurbig P, Pandey A. Human Proteinpedia enables sharing of human protein data, Nat Biotechnol. 26(2) 164-7 (2008). [No abstract available] [Pubmed]
McCord RA, Michishita E, Hong T, Berber E, Boxer LD, Kusumoto R, Guan S, Shi X, Gozani O, Burlingame AL, Bohr VA, and Chua KF. SIRT6 stabilizes DNA-dependent Protein Kinase at chromatin for DNA double-strand break repair, Aging 1 109-121 (2009).
Medzihradszky KF. Characterization of site-specific N-glycosylation, Methods Mol Biol. 446 293-316 (2008). [Pubmed]
Medzihradszky KF, Guan S, Maltby DA, Burlingame AL. Sulfopeptide fragmentation in electron-capture and electron-transfer dissociation, J Am Soc Mass Spectrom. 18(9) 1617-24 (2007). [Pubmed]
Montecchi-Palazzi L, Beavis R, Binz PA, Chalkley RJ, Cottrell J, Creasy D, Shofstahl J, Seymour SL, Garavelli JS. The PSI-MOD community standard for representation of protein modification data, Nat Biotechnol. 26(8) 864-6 (2008). [Pubmed]
Mooberry SL, Hilinski MK, Clark EA, Wender PA. Function-oriented synthesis: biological evaluation of laulimalide analogues derived from a last step cross metathesis diversification strategy, Mol. Pharm. 5(5) 829-838 (2008). [Pubmed]
Németh-Pongrácz V, Barabás O, Fuxreiter M, Simon I, Pichová I, Rumlová M, Zábranská H, Svergun D, Petoukhov M, Harmat V, Klement E, Hunyadi-Gulyás E, Medzihradszky KF, Kónya E, Vértessy BG. Flexible segments modulate co-folding of dUTPase and nucleocapsid proteins, Nucleic Acids Res. 35(2) 495-505 (2007). [Pubmed]
Nomura AM, Marnett AB, Shimba N, Dötch, Craik, CS. One Functional Switch Mediates Reversible and Irreversible Inactivation of a Herpesvirus Protease, Biochemistry 45(11) 3572-9 (2006). [Pubmed]
O’Brien TC, Mackey ZB, Fetter, RD, Choe Y, O’Donoghue AJ, Zhou M, Craik CS, Caffrey CR, McKerrow JH. A Parasite Cysteine Protease is Key to Host Protein Degradation and Iron Acquisition, J Biol Chem 283(43) 28934-43 (2008). [Pubmed]
O’Donoghue AJ, Mahon CS, Goetz DH, O’Malley JM, Gallagher DM, Zhou M, Murray PG, Craik CS, Tuohy MG. Inhibition of a Secreted Glutamic Peptidase Prevents Growth of the Fungus Talaromyces emersonii, J Biol Chem. 283(43) 29186-95 (2008). [Pubmed]
Ohno I, Tomizawa M, Durkin KA, Casida JE, Kagabu S. Neonicotinoid Substituents Forming a Water Bridge at the Nicotinic Acetylcholine Receptor, J Agric Food Chem. 57(6) 2436-40 (2009). [Pubmed]
Ohno I, Tomizawa M, Durkin KA, Naruse Y, Casida JE, Kagabu S. Molecular Features of Neonicotinoid Pharmacophore Variants Interacting with the Insect Nicotinic Receptor, Chem Res Toxicol. 22(3) 476-82 (2009). [Pubmed]
Olsen O, Funke L, Long JF, Fukata M, Kazuta T, Trinidad JC, Moore KA, Misawa H, Welling PA, Burlingame AL, Zhang M, Bredt DS. Renal defects associated with improper polarization of the CRB and DLG polarity complexes in MALS-3 knockout mice, J Cell Biol. 179(1) 151-64 (2007). [Pubmed]
Ortiz-Muñoz G, Houard X, Martín-Ventura JL, Ishida BY, Loyau S, Rossignol P, Moreno JA, Kane JP, Chalkley RJ, Burlingame AL, Michel JB, Meilhac O. HDL antielastase activity prevents smooth muscle cell anoikis, a potential new antiatherogenic property, FASEB J. 23(9) 3129-39 (2009). [Pubmed]
Oses-Prieto J, Zhang X, Burlingame AL. Formation of epsilon-formyllysine on silver-stained proteins: implications for assignment of isobaric dimethylation sites by tandem mass spectrometry, Mol Cell Proteomics 6(2) 181-192 (2007). [Pubmed]
Ott PG, Varga GJ, Szatmári A, Bozsó Z, Klement E, Medzihradszky KF, Besenyei E, Czelleng A, Klement Z. Novel extracellular chitinases rapidly and specifically induced by general bacterial elicitors and suppressed by virulent bacteria as a marker of early basal resistance in tobacco, Mol Plant Microbe Interact. 19(2) 161-72 (2006). [Pubmed]
Padilla BE, Cottrell GS, Roosterman D, Pikios S, Muller L, Steinhoff M, Bunnett NW. Endothelin-converting enzyme-1 regulates endosomal sorting of calcitonin receptor-like receptor and beta-arrestins, J Cell Biol 179(5) 981-97 (2007). [Pubmed]
Palágyi-Mészáros LS, Maróti J, Latinovics D, Balogh T, Klement E, Medzihradszky KF, Rákhely G, Kovács KL. Electron-transfer subunits of the NiFe hydrogenases in Thiocapsa roseopersicina BBS, FEBS J. 276(1) 164-74 (2009). [Pubmed]
Pham D, Zhang L, Jones EF. &lfqt; Biopolymers, Dendrimer and Liposomes Based Nano-platofrms for Optical Imaging&rtqt; in Nano Platform-Based Molecular Imaging; Hoboken, New Jersey: John Wiley & Sons, Inc. 2009. (IN PRESS)
Prakash O, Kumar A, Kinger M, Singh SP. I(III) mediated synthesis of new 5-aryl-3-(4-hydroxy-6-methyl-2H-pyran-2-one-3-yl)-1-phenylpyrazoles from dehydrogenation of 5-aryl-3-(4-hydroxy-6-methyl-2H-pyran-2-one-3-yl)-1-phenylpyrazolines, Indian J Chem. 45B 456-460 (2006).
Raorane DA, Lim MD, Chen FF, Craik CS, Majumdar A. Quantitative and Label-Free Technique for Measuring Protease Activity and Inhibition using a Microfluidic Cantilever Array, Nano Lett. 8(9) 2968-74 (2008). [Pubmed]
Recht J, Tsubota T, Tanny J C, Diaz R L, Berger J M, Zhang X, Garcia B A, Shabanowitz J, Burlingame A L, Hunt D F, Kaufman P D, Allis C D. Histone chaperone Asf1 is required for histone H3 lysine 56 acetylation, a modification associated with S phase in mitosis and meiosis, Proc Natl Acad Sci U S A 103(18) 6988-93 (2006). [Pubmed]
Rodriguez H, Snyder M, Uhlén M, Andrews P, Beavis R, Borchers C, Chalkley RJ, Cho SY, Cottingham K, Dunn M, Dylag T, Edgar R, Hare P, Heck AJ, Hirsch RF, Kennedy K, Kolar P, Kraus HJ, Mallick P, Nesvizhskii A, Ping P, Pontén F, Yang L, Yates JR, Stein SE, Hermjakob H, Kinsinger CR, Apweiler R. Recommendations from the 2008 International Summit on Proteomics Data Release and Sharing Policy: the Amsterdam principles, J Proteome Res. 8(7) 3689-92 (2009). [Pubmed]
Rodriguez-Viciana P, Oses-Prieto J, Burlingame A, Fried M, McCormick F. A phosphatase holoenzyme comprised of Shoc2/Sur8 and the catalytic subunit ofPP1 functions as an M-Ras effector to modulate Raf activity, Mol Cell. 22(2) 217-30 (2006). [Pubmed]
Roosterman D, Cottrell GS, Padilla BE, Muller L, Eckman CB, Bunnett NW, Steinhoff M. Endothelin-converting enzyme 1 degrades neuropeptides in endosomes to control receptor recycling, Proc Natl Acad Sci USA 104(28) 11838-43 (2007). [Pubmed]
Roosterman D, Kempkes C, Cottrell GS, Padilla BE, Bunnett NW, Turck CW, Steinhoff M. Endothelin-converting enzyme-1 degrades internalized somatostatin-14, Endocrinology 149(5) 2200-7 (2008). [Pubmed]
Ruhela D, Riviere K, Szoka FC. Efficient synthesis of an aldehyde functionalized hyaluronic acid and its application in the preparation of hyaluronan-lipid conjugates, Bioconjug Chem 17(5) 1360-3 (2006). [Pubmed]
Sherman J, McKay MJ, Ashman K, Molloy MP. Unique ion signature mass spectrometry, a deterministic method to assign peptide identity, Mol Cell Proteomics. 8(9) 2051-62 (2009). [Pubmed]
Simon MD, Chu F, Racki LR, de la Cruz CC, Burlingame AL, Panning B, Narlikar GJ, Shokat KM. The site-specific installation of methyllysine analogs into recombinant histones, Cell 128(5) 1003-12 (2007). [Pubmed]
Simon MD, Feldman ME, Rauh D, Maris AE, Wemmer DE, Shokat KM. The structure and properties of a re-engineered homeodomain protein-DNA interface, ACS Chem Biol. 1(12) 755-60 (2006). [Pubmed]
Singh SP, Kumar V, Aggarwal R, Elguero J. The reaction of aryl and heteroarylhydrazines with aryl-trifluoromethyl-_-diketones, Journal of Heterocyclic. Chemistry 43 1003-1014 (2006).
Skibbe D, Fernandes J, Medzihradsky KF, Burlingame AL, Waltbot V. Mutator transposon activity reprograms the transcriptome and proteome of developing maize anthers, Plant J 59(4) 622-633 (2009). [Pubmed]
Sun Z, Ahsan MM, Wang H, Du C, Abbott C, Moradian-Oldak J. Assembly and processing of an engineered amelogenin proteolytic product (rP148), Eur J Oral Sci 114(S1) 59-63; discussion 93-5 & 379-80 (2006). [Pubmed]
Sun Z, Fan D, Fan Y, Du C, Moradian-Oldak J. Enamel Proteases Reduce Amelogenin-Apatite Binding, J Den Res. 87(12) 1133-7 (2008). [Pubmed]
Szabo E, Klement E, Medzihradszky KF, Varga GJ, Besenyei E, Ott PG. Changes of apoplast protein composition during early basal resistance (EBR) in tobacco, Cereal Res Commun 34 677-680 (2006).
Szájli E, Fehér T, Medzihradszky KF. Investigating the quantitative nature of MALDI-TOF MS, Mol Cell Proteomics. 7(12) 2410-8 (2008). [Pubmed]
Szollosi E, Bokor M, Bodor A, Perczel A, Klement E, Medzihradszky KF, Tompa K, Tompa P. Intrinsic structural disorder of DF31, a Drosophila protein of chromatin decondensation and remodeling activities, J Proteome Res. 7(6) 2291-9 (2008). [Pubmed]
Tagwerker C, Flick K, Cui M, Guerrero C, Dou Y, Auer B, Baldi P, Huang L, Kaiser P. A tandem affinity tag for two-step purification under fully denaturing conditions: application in ubiquitin profiling and protein complex identification combined with in vivocross-linking, Mol Cell Proteomics 5(4) 737-48 (2006). [Pubmed]
Tagwerker C, Zhang H, Wang X, Larsen LSZ, Lathrop RH, Hatfield GW, Auer B, Huang L, Kaiser P. HB tag modules for PCR-based gene tagging and tandem affinity purification in Saccharomyces cerevisiae, Yeast 23(8) 623-32 (2006). [Pubmed]
Tang W, Deng Z, Oses-Prieto JA, Suzuki N, Zhu S, Zhang X, Burlingame AL, Wang ZY. Proteomic studies of brassinosteroid signal transduction using prefractionation and 2-D DIGE, Molecular Cellular Proteomics 7(4) 728-38 (2008). [Pubmed]
Tang W, Kim TW, Oses-Prieto JA, Sun Y, Deng Z,, Zhu S, Wang R, Burlingame AL, Wang ZY. BSKs mediate signal transduction from the receptor kinase BRI1 in Arabidopsis, Science 321(5888) 557-560 (2008). [Pubmed]
Thalhammer A, Trinidad JC, Burlingame AL, Schoepfer R. Densin-180: revised membrane topology, domain structure and phosphorylation status, J Neurochem. 109(2) 297-302 (2009). [Pubmed]
Tomizawa M, Casida JE. Molecular recognition of neonicotinoid insecticides: the determinants of life or death, Acc Chem Res. 42(2) 260-9 (2009). [Pubmed]
Tomizawa M, Maltby D, Medzihradszky KF, Zhang N, Durkin KA, Presley J, Talley TT, Taylor P, Burlingame AL, Casida JE. Defining nicotinic agonist binding surfaces through photoaffinity labeling, Biochemistry 46(30) 8798-8806 (2007). [Pubmed]
Tomizawa M, Maltby D, Talley TT, Durkin KA, Medzihradszky KF, Burlingame AL,Taylor P, Casida JE. Atypical nicotinic agonist bound conformations conferring subtype selectivity, Proc Natl Acad Sci U S A 105(5) 1728-32 (2008). [Pubmed]
Tomizawa M, Talley TT, Maltby D, Durkin KA, Medzihradszky KF, Burlingame AL, Yalor P, Casida JE. Mapping the elusive neonicotinoid binding site, Proc Nat Acad Sci USA 104(21) 9075-9080 (2007). [Pubmed]
Tomizawa M, Talley TT, Park JF, Maltby D, Medzihraszky KF, Durkin KA, Cornejo-Brave JM, Burlingame AL, Casida JE, Talyor P. Nicotinic Agonist Binding Site Mapped by Methionine- and Tyrosine-Scanning Coupled with Azidochloropyridinyl Photoaffinity Labeling, J Med Chem 52(12) 3735-3741 (2009). [Pubmed]
Trinidad JC, Specht CG, Thalhammer A, Schoepfer R, Burlingame AL. Comprehensive identification of phosphorylation sites in postsynaptic density preparations, Mol Cell Proteomics 5(5) 914-22 (2006). [Pubmed]
Trinidad JC, Thalhammer A, Specht CG, Lynn AJ, Baker PR, Schoepfer R, Burlingame AL. Quantitative analysis of synaptic phosphorylation and protein expression, Mol Cell Proteomics 7(4) 684-96 (2008). [Pubmed]
Trost BM, Aponick A. Palladium-catalyzed asymmetric allylic alkylation of meso- and dl-1,2-divinylethylene carbonate, J Am Chem Soc 128(12) 3931-3 (2006). [Pubmed]
Trost BM, Bream RN, Xu J. Asymmetric allylic alkylation of cyclic vinylogous esters and thioesters by Pd-catalyzed decarboxylation of enol carbonate and beta-ketoester substrates, Angew Chem Int Ed Engl 45(19) 3109-12 (2006). [Pubmed]
Trost BM, Brennan MK. Palladium asymmetric allylic alkylation of prochiral nucleophiles: horsfiline, Org Lett 8(10) 2027-30 (2006). [Pubmed]
Trost BM, Chung CK. Vanadium-catalyzed addition of propargyl alcohols and imines, J Am Chem Soc 128(32) 10358-9 (2006). [Pubmed]
Trost BM, Dong G. New class of nucleophiles for palladium-catalyzed asymmetric allylic alkylation. Total synthesis of agelastatin A, J Am Chem Soc 128(18) 6054-5 (2006). [Pubmed]
Trost BM, Horne DB, Woltering MJ. Palladium-catalyzed DYKAT ofbutadiene monoepoxide: enantioselective total synthesis of (+)-DMDP, (-)-bulgecinine, and (+)-broussonetine G, Chemistry 12(25) 6607-20 (2006). [Pubmed]
Trost BM, Huang X. Synthesis of Substituted 1,3-Diene Synthons by a Ru-Catalyzed Diyne Hydrative Cyclization, Chemistry - An Asian Journal 1(3) 469-478 (2006). [Pubmed]
Trost BM, Jaratjaroonphong J, Reutrakul V. A direct catalytic asymmetric Mannich-type reaction via a dinuclear zinc catalyst: synthesis of either anti- or syn-alpha-hydroxy-beta-amino ketones, J Am Chem Soc 128(9) 2778-9 (2006). [Pubmed]
Trost BM, Jiang C. Catalytic Enantioselective Construction of All-Carbon Quaternary Stereocenters, Synthesis 3 369-396 (2006).
Trost BM, Machacek MR, Aponick A. Predicting the stereochemistry of diphenylphosphino benzoic acid (DPPBA)-based palladium-catalyzed asymmetric allylic alkylation reactions: a working model, Acc Chem Res 39(10) 747-60 (2006). [Pubmed]
Trost BM, Machacek MR, Faulk BD. Sequential Ru-Pd catalysis: a two-catalyst one-pot protocol for the synthesis of N- and O-heterocycles, J Am Chem Soc 128(20) 6745-54 (2006). [Pubmed]
Trost BM, McClory A. Ruthenium-catalyzed alkylative lactonization and carbocyclization, Org Lett 8(17) 3627-9 (2006). [Pubmed]
Trost BM, Quancard J. Palladium-catalyzed enantioselective C-3 allylation of 3-substituted-1H-indoles using trialkylboranes, J Am Chem Soc 128(19) 6314-5 (2006). [Pubmed]
Trost BM, Richardson J, Yong K. Palladium-catalyzed chemo- and enantioselective oxidation of allylic esters and carbonates, J Am Chem Soc 128(8) 2540-1 (2006). [Pubmed]
Trost BM, Silverman SM, Stambuli JP. Palladium-catalyzed asymmetric [3+2] cycloaddition of trimethylenemethane with imines., J Am Chem Soc 129(41) 12398-9 (2007). [Pubmed]
Trost BM, Weiss AH, von Wangelin AJ. Dinuclear Zn-catalyzed asymmetric alkynylation of unsaturated aldehydes, J Am Chem Soc 128(1) 8-9 (2006). [Pubmed]
Trost BM, Weiss AH. Catalytic enantioselective synthesis of adociacetylene B, Org Lett 8(20) 4461-4 (2006). [Pubmed]
Trost BM, Xie J. Palladium-catalyzed asymmetric ring expansion of allenylcyclobutanols: an asymmetric Wagner-Meerwein shift, J Am Chem Soc 128(18) 6044-5 (2006). [Pubmed]
Trost BM, Xu J, Reichle M. Enantioselective Synthesis of -Tertiary Hydroxyaldehydes by Palladium-Catalyzed Asymmetric Allylic Alkylation of Enolates, J Am Chem Soc. 129(2) 282-283 (2007). [Pubmed]
Trost BM, Zhang T. Asymmetric synthesis of alpha-substituted aldehydes by Pd-catalyzed asymmetric allylic alkylation-alkene isomerization-Claisen rearrangement, Org Lett 8(26) 6007-10 (2006). [Pubmed]
Trost BM, Zhang Y. Mo-catalyzed regio-, diastereo-, and enantioselective allylic alkylation of 3-aryloxindoles., J Am Chem Soc 129(47) 14548-9 (2007). [Pubmed]
Valacco MP, Varone C, Malicet C, Cánepa Eduardo, Iovanna Juan Lucio, Moreno Silvia. Cell growth-dependent subcellular localization of p8, J Cell Biochem. 97(5) 1066-79 (2006). [Pubmed]
Varga B, Barabás O, Kovári J, Tóth J, Hunyadi-Gulyás E, Klement E, Medzihradszky KF, Tölgyesi F, Fidy J, Vértessy BG. Active site closure facilitates juxtaposition of reactant atoms for initiation of catalysis by human dUTPase, FEBS Lett. 581(24) 4783-8 (2007). [Pubmed]
Van Petegem F, Duderstadt KE, Clark KA, Wang M, Minor DL Jr. Alanine-scanning mutagenesis defines a conserved energetic hotspot in the CaValpha1 AID-CaVbeta interaction site that is critical for channel modulation, Structure 16(2) 280-294 (2008). [Pubmed]
Vincze O, Tokesi N, Olah J, Hlavanda E, Zotter A, Horvath I, Lehotzky A,Tirian L, Medzihradszky KF, Kovacs J, Orosz F, Ovadi J. Tubulin polymerization promoting proteins (TPPPs): members of a new family withdistinct structures and functions, Biochemistry 45(46) 13818-26 (2006). [Pubmed]
Vosseller K, Trinidad JC, Chalkley RJ, Specht CG, Thalhammer A, Lynn AJ,Snedecor JO, Guan S, Medzihradszky KF, Maltby DA, Schoepfer R, Burlingame AL. O-linked N-acetylglucosamine proteomics of postsynaptic density preparationsusing lectin weak affinity chromatography and mass spectrometry, Mol Cell Proteomics 5(5) 923-34 (2006). [Pubmed]
Walther TC, Aguilar PS, Fröhlich F, Chu F, Moreira K, Burlingame AL, Walter P. Pkh-kinases control eisosome assembly and organization, EMBO J. 26(24) 4946-55 (2007). [Pubmed]
Wender PA, Bi FC, Buschmann N, Gosselin F, Kan C, Kee J-M, Ohmura H. Studies on oxidopyrylium [5+2] cycloadditions: toward a general synthetic route to the c12-hydroxy daphnetoxins, Org Lett 8(23) 5373-6 (2006). [Pubmed]
Wender PA, Christy JP. Rhodium(I)-catalyzed [4+2+2] cycloadditions of 1,3-dienes, alkenes, and alkynes for the synthesis of cyclooctadienes, J Am Chem Soc 128(16) 5354-5 (2006). [Pubmed]
Wender PA, Croatt MP, Deschamps NM. Metal-catalyzed [2+2+1]cycloadditions of 1,3-dienes, allenes, and CO, Angew Chem Int Ed Engl. 45(15) 2459-62 (2006). [Pubmed]
Wender PA, Croatt MP, Witulski B. New reactions and step economy: the total synthesis of (+/-)-salsolene oxide based on the type II transition metal-catalyzed intramolecular [4+4] cycloaddition, Tetrahedron 62 7505-7511 (2006).
Wender PA, D’Angelo N, Elitzin VI, Ernst M, Jackson-Ugueto EE, Kowalski JA, McKendry S, Rehfeuter M, Sun R, Voigtaender D. Function oriented synthesis: studies aimed at the synthesis and mode of action of 1a-alkyldaphnane analogues, Org Lett. 9(9) 1829-32 (2007). [Pubmed]
Wender PA, Deschamps NM, Sun R. RhI-catalyzed C-C bond activation: seven-membered ring synthesis by a [6+1] carbonylative ring-expansion reaction of allenylcyclobutanes, Angew Chem Int Ed Engl. 45(24) 3957-60 (2006). [Pubmed]
Wender PA, Galliher WC, Goun EA, Jones LR, Pillow TH. The design of guanidinium-rich transporters and their internalization mechanisms, Adv Drug Deliv Rev. 60(4-5) 452-472 (2008). [Pubmed]
Wender PA, Haustedt LO, Lim J, Love JA, Williams TJ, Yoon J-Y. Asymmetric catalysis of the [5 + 2] cycloaddition reaction of vinylcyclopropanes and pi-systems, J Am Chem Soc 128(19) 6302-3 (2006). [Pubmed]
Wender PA, Hilinski MK, Skaanderup PR, Soldermann NG, Mooberry SL. Pharmacophore mapping in the laulimalide series: total synthesis of a vinylogue for a late-stage metathesis diversification strategy, Org Lett 8(18) 4105-8 (2006). [Pubmed]
Wender PA, Hilinski MK, Soldermann N, Mooberry SL. Total synthesis and biological evaluation of 11-desmethyllaulimalide, a highly potent simplified laulimalide analogue, Org Lett 8(7) 1507-10 (2006). [Pubmed]
Wender PA, Horan JC, Verma VA. Total synthesis and initial biological evaluation of new B-ring-modified bryostatin analogs, Org Lett 8(23) 5299-302 (2006). [Pubmed]
Wender PA, Horan JC. Synthesis and PKC binding of a new class of a-ring diversifiable bryostatin analogues utilizing a double asymmetric hydrogenation and cross-coupling strategy, Org Lett 8(20) 4581-4 (2006). [Pubmed]
Wender PA, Kee J-M, Warrington JM. Practical synthesis of prostratin, DPP, and their analogs, adjuvant leads against latent HIV, Science 320(5876) 649-652 (2008). [Pubmed]
Wender PA, Paxton TJ, Williams TJ. Cyclopentadienone synthesis by rhodium (I)-catalyzed cycloaddition reactions of cyclopropenones and alkynes, J Am Chem Soc. 128(46) 14814-5 (2006). [Pubmed]
Wender PA, Verma VA, Paxton TJ, Pillow TH. Function-oriented synthesis, step economy, and drug design, Acc Chem Res 41(1) 40-49 (2008). [Pubmed]
Wille H, Shanmugam M, Murugesu M, Ollesch J, Stubbs G, Long J.R, Safar JG, Prusiner SB. Surface charge of polyoxometalates modulates polymerization of the scrapie prion protein, Proc Natl Acad Sci U S A 106(10) 3740-5 (2009). [Pubmed]
Worringer KA, Chu F, Panning B. The zinc finger protein Zn72D and DEAD box helicase Belle interact and control maleless mRNA and protein levels, BMC Mol Biol. 10 33 (2009). [Pubmed]
Yoshihara HA, Mahrus S, Wells JA. Tags for labeling protein N-termini with subtiligase for proteomics, Bioorg Med Chem Lett. 18(22) 6000-3 (2008). [Pubmed]
Zhou Q, Cadrin M, Herrmann H, Chen CH, Chalkley RJ, Burlingame AL, Omary MB. Keratin 20 serine 13 phosphorylation is a stress and intestinal goblet cellmarker, J Biol Chem. 281(24) 16453-61 (2006). [Pubmed]
Zhang W, St-Gelais F, Grabner CP, Trinidad JC, Sumioka A, Morimoto-Tomita M, Kim KS, Straub C, Burlingame AL, Howe JR, Tomita S. A transmembrane accessory subunit that modulates kainate-type glutamate receptors, Neuron. 61(3) 385-96 (2009). [Pubmed]
Zsigmond L, Rigó G, Szarka A, Székely G, Otvös K, Darula Z, Medzihradszky KF, Koncz C, Koncz Z, Szabados L. Arabidopsis PPR40 connects abiotic stress responses to mitochondrial electron transport, Plant Physiol. 146(4) 1721-37 (2008). [Pubmed]